178 lines
6.4 KiB
FortranFixed
178 lines
6.4 KiB
FortranFixed
subroutine funkmin_UnivPhotoFit(ndim,beta,fvalue)
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implicit none
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include '../testarea/LeafGasParams.h'
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include '../testarea/LeafGasHybridFit.h'
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integer ndim
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double precision beta(1:ndim),fvalue
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!(in) ndim: the dimension of the parameter vector
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!(in) beta: the parameters
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!(out) fvalue: the value of the cost function at beta
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!
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!---------Local variables--------------------------------------------------
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integer i,n,ilimit0,nummismatch
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double precision pointfvalue
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!----------- End of variables declaration ---------------------------------
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!check to see if parameters are out of bounds.
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if(isitbounded.eq.1)then
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do i=1,ndim
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if(beta(i).lt.betamin(i).or.beta(i).gt.betamax(i))then
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! parameter out of bound
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fvalue=1.0d+100
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return
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endif
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enddo
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endif
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n=0
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do i=1,ntotunivparams
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!replace the values in univparams with those optimized
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if(ifixunivparams(i).eq.1)then
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n=n+1
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univparams(i)=beta(n)
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endif
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enddo
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call UnivParamsAlloc(2)
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ilimit0=Currentilimittype
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fvalue=0.0d0
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nummismatch=0
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do i=1,ntotsamples
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if(Currentilimittype.le.4.and.Currentiknowlimit.eq.1)
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&ilimit0=Currentiphotolimit(i)+4
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call leafunivphotosyn(Currentiknowlimit,ilimit0,ifitmode,
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&aPPFDlf(i),templeaf(i),pco2i(i),po2i(i),chlflphips2(i),
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&anet_obs(i),weitresponses(i:i,1:1),weitresponses(i:i,1:1),
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&weitresponses(i:i,2:2),weitresponses(i:i,1:1),
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&pco2i_pred(i),anet_pred(i),Postiphotolimit(i),pco2c(i),
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&PhiPSII_pred(i),anet_pred_flu(i),pco2i_pred_flu(i),
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&pco2c_anet_flu(i),pco2c_pco2i_flu(i),pointfvalue)
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if(pco2c(i).lt.0.0d0.and.Currentiknowlimit.ne.-1)then
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fvalue=1.0d+101
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return
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endif
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fvalue=fvalue+pointfvalue
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if(Currentiknowlimit.eq.2.and.Currentiphotolimit(i).ne.
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&Postiphotolimit(i))nummismatch=nummismatch+1
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enddo
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if(nummismatch.ne.0)then
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!penalize inadmissible fit
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fvalue=fvalue*(dble(nummismatch)*1000.0d0)**2+
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&dble(nummismatch)*1000.0d0
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endif
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return
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end subroutine funkmin_UnivPhotoFit
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!$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
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double precision function f1dim_UnivPhotoFit(x)
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implicit none
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double precision x
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CU USES funkmin_UnivPhotoFit
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INTEGER j
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!((((((((((((((((((((((((((((((((((((((((((((((((((((
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integer NMAX,ncom
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parameter(NMAX=1000)
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double precision pcom(NMAX),xicom(NMAX)
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COMMON /f1com/ pcom,xicom,ncom
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save /f1com/
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!))))))))))))))))))))))))))))))))))))))))))))))))))))
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double precision xt(NMAX)
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do 11 j=1,ncom
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xt(j)=pcom(j)+x*xicom(j)
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11 continue
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call funkmin_UnivPhotoFit(ncom,xt,f1dim_UnivPhotoFit)
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return
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END
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!&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&&
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SUBROUTINE FCN_UnivPhotoFit(N,M,NP,NQ,
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+ LDN,LDM,LDNP,
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+ BETA,XPLUSD,
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+ IFIXB,IFIXX,LDIFX,
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+ IDEVAL,F,FJACB,FJACD,
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+ ISTOP)
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implicit none
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include '../testarea/LeafGasParams.h'
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include '../testarea/LeafGasHybridFit.h'
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C SUBROUTINE ARGUMENTS
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C ==> N NUMBER OF OBSERVATIONS
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C ==> M NUMBER OF COLUMNS IN EXPLANATORY VARIABLE
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C ==> NP NUMBER OF PARAMETERS
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C ==> NQ NUMBER OF RESPONSES PER OBSERVATION
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C ==> LDN LEADING DIMENSION DECLARATOR EQUAL OR EXCEEDING N
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C ==> LDM LEADING DIMENSION DECLARATOR EQUAL OR EXCEEDING M
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C ==> LDNP LEADING DIMENSION DECLARATOR EQUAL OR EXCEEDING NP
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C ==> BETA CURRENT VALUES OF PARAMETERS
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C ==> XPLUSD CURRENT VALUE OF EXPLANATORY VARIABLE, I.E., X + DELTA
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C ==> IFIXB INDICATORS FOR "FIXING" PARAMETERS (BETA)
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C ==> IFIXX INDICATORS FOR "FIXING" EXPLANATORY VARIABLE (X)
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C ==> LDIFX LEADING DIMENSION OF ARRAY IFIXX
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C ==> IDEVAL INDICATOR FOR SELECTING COMPUTATION TO BE PERFORMED
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C <== F PREDICTED FUNCTION VALUES
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C <== FJACB JACOBIAN WITH RESPECT TO BETA
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C <== FJACD JACOBIAN WITH RESPECT TO ERRORS DELTA
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C <== ISTOP STOPPING CONDITION, WHERE
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C 0 MEANS CURRENT BETA AND X+DELTA WERE
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C ACCEPTABLE AND VALUES WERE COMPUTED SUCCESSFULLY
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C 1 MEANS CURRENT BETA AND X+DELTA ARE
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C NOT ACCEPTABLE; ODRPACK SHOULD SELECT VALUES
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C CLOSER TO MOST RECENTLY USED VALUES IF POSSIBLE
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C -1 MEANS CURRENT BETA AND X+DELTA ARE
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C NOT ACCEPTABLE; ODRPACK SHOULD STOP
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C INPUT ARGUMENTS, NOT TO BE CHANGED BY THIS ROUTINE:
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INTEGER I,IDEVAL,ISTOP,L,LDIFX,LDM,LDN,LDNP,M,N,NP,NQ
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DOUBLE PRECISION BETA(NP),XPLUSD(LDN,M)
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INTEGER IFIXB(NP),IFIXX(LDIFX,M)
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C OUTPUT ARGUMENTS:
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DOUBLE PRECISION F(LDN,NQ),FJACB(LDN,LDNP,NQ),FJACD(LDN,LDM,NQ)
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integer k
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double precision fvalue
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c
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ISTOP=0
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do I=1,NP
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if(BETA(I).lt.betamin(I).or.
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&BETA(I).gt.betamax(I))then
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ISTOP=1
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return
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endif
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enddo
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do I=1,N
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pco2i(I)=XPLUSD(I,1)
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aPPFDlf(I)=XPLUSD(I,2)
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templeaf(I)=XPLUSD(I,3)
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po2i(I)=XPLUSD(I,4)
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if(Currentiknowlimit.eq.-1)chlflphips2(I)=XPLUSD(I,M)
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enddo
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IF (MOD(IDEVAL,10).GE.1) THEN
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call funkmin_UnivPhotoFit(NP,BETA,fvalue)
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if(fvalue.gt.1.0d+20)then
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ISTOP=1
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return
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endif
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DO 100 I = 1,N
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if(Currentiknowlimit.eq.-1)then
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F(I,1)=anet_pred_flu(I)
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else
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F(I,1)=anet_pred(I)
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endif
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100 CONTINUE
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if(NQ.eq.2)then
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DO 110 I = 1,N
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F(I,NQ)=PhiPSII_pred(I)
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110 CONTINUE
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endif
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END IF
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RETURN
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END
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!$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$$
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double precision function ff_pikaia(ndim,beta01)
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implicit none
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include '../testarea/LeafGasParams.h'
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integer ndim,i
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double precision beta01(ndim),beta(ndim),fvalue
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do i=1,ndim
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! beta01(i)=(beta(i)-betamin(i))/(betamax(i)-betamin(i))
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beta(i)=betamin(i)+beta01(i)*(betamax(i)-betamin(i))
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enddo
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call funkmin_UnivPhotoFit(ndim,beta,fvalue)
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ff_pikaia=1.0d0/(fvalue+0.00001d0)
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return
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end
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